Proteins 138 topics

Everything that has to do with the Martini extension for proteins and peptides.

Subject	Replies / Views	Last Post
Peptide expulsed from Bilayer Topic started 5 months 1 week ago, by Alvaro Last Post 5 months 1 week ago by Alvaro	Replies:0 Views:1068	Last Post by Alvaro 5 months 1 week ago
phosphorylated serine Topic started 1 year 3 days ago, by htsurui Last Post 1 year 2 days ago by htsurui	Replies:2 Views:1645	Last Post by htsurui 1 year 2 days ago
Structure file generation for PEGylated oligopeptides with Martini3 Topic started 1 year 3 weeks ago, by antabear Last Post 1 year 6 days ago by antabear	Replies:4 Views:585	Last Post by antabear 1 year 6 days ago
Protonation in Martini3/martinize2 Topic started 1 year 4 weeks ago, by liguo_UCAS Last Post 1 year 4 weeks ago by liguo_UCAS	Replies:1 Views:497	Last Post by liguo_UCAS 1 year 4 weeks ago
Uncharged Lysine in MARTINI3 Topic started 2 years 3 months ago, by rapha.v Last Post 1 year 4 weeks ago by liguo_UCAS	Replies:1 Views:1251	Last Post by liguo_UCAS 1 year 4 weeks ago
elnedyn vs elnedynp Topic started 1 year 2 months ago, by CMM Last Post 1 year 2 months ago by CMM	Replies:0 Views:716	Last Post by CMM 1 year 2 months ago
Histidine Protonation with elnedyn22 Topic started 8 years 1 week ago, by Samuel Last Post 1 year 4 months ago by qiaobf	Replies:1 Views:4203	Last Post by qiaobf 1 year 4 months ago
Martini bead size vs equilibrium bond lengths for amino acids residues Topic started 1 year 4 months ago, by subha Last Post 1 year 4 months ago by subha	Replies:0 Views:705	Last Post by subha 1 year 4 months ago
Martini 2.1P does not have "D" polarisable particles Topic started 1 year 6 months ago, by Kusay Last Post 1 year 6 months ago by Kusay	Replies:0 Views:1115	Last Post by Kusay 1 year 6 months ago
protein coarse grain model quality check Topic started 1 year 7 months ago, by tanvipar123 Last Post 1 year 7 months ago by riccardo	Replies:1 Views:722	Last Post by riccardo 1 year 7 months ago
Disulfide bridges Topic started 1 year 7 months ago, by julybel Last Post 1 year 7 months ago by julybel	Replies:0 Views:834	Last Post by julybel 1 year 7 months ago
Problem in minimizing protein/bilayer system Topic started 1 year 9 months ago, by abhinavsri89 Last Post 1 year 9 months ago by abhinavsri89	Replies:0 Views:1155	Last Post by abhinavsri89 1 year 9 months ago
Problem with Martini3 md run crash due to lincs warning in protein Topic started 1 year 10 months ago, by nanogod Last Post 1 year 9 months ago by riccardo	Replies:1 Views:1145	Last Post by riccardo 1 year 9 months ago
Protein coming out from box in a lipid-protein system Topic started 1 year 9 months ago, by ROY Last Post 1 year 9 months ago by ROY	Replies:0 Views:897	Last Post by ROY 1 year 9 months ago
minimization not converged with charged termini Topic started 1 year 11 months ago, by nanogod Last Post 1 year 11 months ago by nanogod	Replies:1 Views:1176	Last Post by nanogod 1 year 11 months ago
Protocol for determination of monomers Topic started 1 year 11 months ago, by JBinder Last Post 1 year 11 months ago by JBinder	Replies:0 Views:876	Last Post by JBinder 1 year 11 months ago
GPI-anchored Protein Topology Topic started 2 years 1 week ago, by Maxim Zaigraev Last Post 2 years 1 week ago by Maxim Zaigraev	Replies:0 Views:1129	Last Post by Maxim Zaigraev 2 years 1 week ago
Curcumin coarse grained (beads definition) Topic started 2 years 2 months ago, by Sherllyn Last Post 2 years 2 months ago by riccardo	Replies:1 Views:1538	Last Post by riccardo 2 years 2 months ago
histidine in the form of HSP Topic started 2 years 2 months ago, by hind Last Post 2 years 2 months ago by riccardo	Replies:1 Views:1332	Last Post by riccardo 2 years 2 months ago
Visualize virtual atoms in Martini3 Trp Topic started 2 years 3 months ago, by fralav Last Post 2 years 3 months ago by peterkroon	Replies:3 Views:1340	Last Post by peterkroon 2 years 3 months ago

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General Purpose Coarse-Grained Force Field

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Proteins 138 topics