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backward - error
- poojaric
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4 years 1 week ago #8472
by poojaric
backward - error was created by poojaric
Dear All,
I am trying to run the backmapping aquaporin 1 tutorial. I have downloaded all the required files.
When i execute:
./initram-v5.sh -f CG_posre.gro -o aa_charmm.gro -p topol.top -from martini -to charmm36
I get this error: Now executing...
./initram-v5.sh -f CG_posre.gro -o aa_charmm.gro -p topol.top -from martini -to charmm36
Checking dependencies:
backward.py ... /home//TUTORIAL/aquaporin_backmap/backward.py
gmx ... /usr/local/gromacs_2019_1/bin/gmx
/home/TUTORIAL/aquaporin_backmap/backward.py -f CG_posre.gro -raw projected.gro -o 0-backward.gro -kick 0.05 -sol -p topol.top -po backmapped.top -n backmapped.ndx -from martini -to charmm36
File "/home/TUTORIAL/aquaporin_backmap/backward.py", line 351
try:
^
TabError: inconsistent use of tabs and spaces in indentation
Please can I know what may be going wrong. I am using the backward.py and initram-v5.sh as it is without any modifications.
Kind Regards,
Chetan
I am trying to run the backmapping aquaporin 1 tutorial. I have downloaded all the required files.
When i execute:
./initram-v5.sh -f CG_posre.gro -o aa_charmm.gro -p topol.top -from martini -to charmm36
I get this error: Now executing...
./initram-v5.sh -f CG_posre.gro -o aa_charmm.gro -p topol.top -from martini -to charmm36
Checking dependencies:
backward.py ... /home//TUTORIAL/aquaporin_backmap/backward.py
gmx ... /usr/local/gromacs_2019_1/bin/gmx
/home/TUTORIAL/aquaporin_backmap/backward.py -f CG_posre.gro -raw projected.gro -o 0-backward.gro -kick 0.05 -sol -p topol.top -po backmapped.top -n backmapped.ndx -from martini -to charmm36
File "/home/TUTORIAL/aquaporin_backmap/backward.py", line 351
try:
^
TabError: inconsistent use of tabs and spaces in indentation
Please can I know what may be going wrong. I am using the backward.py and initram-v5.sh as it is without any modifications.
Kind Regards,
Chetan
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- poojaric
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4 years 1 week ago #8473
by poojaric
Replied by poojaric on topic backward - error
Hi All,
Error fixed. I had to update the python version and it worked fine.
Kind Regards,
Chetan
Error fixed. I had to update the python version and it worked fine.
Kind Regards,
Chetan
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- riccardo
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4 years 1 week ago #8474
by riccardo
Replied by riccardo on topic backward - error
Thanks for documenting the fix, Chetan.
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