Other Molecules 131 topics

Any question about molecules that doesn't fit in the other forums? Post it here.

Subject	Replies / Views	Last Post
Non-bonded (LJ) parameters for oxygen and carbon dioxide Topic started 1 year 11 months ago, by priyakedia Last Post 1 year 11 months ago by riccardo	Replies:1 Views:871	Last Post by riccardo 1 year 11 months ago
Martini hybrid model. Want to add volume exclusion beads. Topic started 2 years 1 month ago, by nambinik Last Post 2 years 1 month ago by nambinik	Replies:0 Views:1117	Last Post by nambinik 2 years 1 month ago
Modeling polypropylene (PP) sheet Topic started 2 years 5 months ago, by Junb Last Post 2 years 2 months ago by Junb	Replies:6 Views:1638	Last Post by Junb 2 years 2 months ago
Martini forcefield parameters for Mg2++ for a glycosylated protein Topic started 2 years 8 months ago, by zmazhar9 Last Post 2 years 4 months ago by riccardo	Replies:1 Views:1232	Last Post by riccardo 2 years 4 months ago
Beads for triazine Topic started 2 years 5 months ago, by marquez Last Post 2 years 5 months ago by siewert	Replies:1 Views:1125	Last Post by siewert 2 years 5 months ago
FAD protein complex Topic started 2 years 5 months ago, by kodi_nir Last Post 2 years 5 months ago by kodi_nir	Replies:0 Views:902	Last Post by kodi_nir 2 years 5 months ago
bond parameters/SASA optimization for a new molecule Topic started 2 years 6 months ago, by fralav Last Post 2 years 6 months ago by fralav	Replies:0 Views:1148	Last Post by fralav 2 years 6 months ago
Modelling acids like sulfuric acid (H2SO4) Topic started 2 years 6 months ago, by xatzman1999 Last Post 2 years 6 months ago by xatzman1999	Replies:2 Views:981	Last Post by xatzman1999 2 years 6 months ago
Caffeine .itp file Topic started 2 years 7 months ago, by JBinder Last Post 2 years 7 months ago by JBinder	Replies:2 Views:1412	Last Post by JBinder 2 years 7 months ago
Martini forcefield parameters for Mg2+ for a glycosylated protein Topic started 2 years 8 months ago, by zmazhar9 Last Post 2 years 7 months ago by xavier	Replies:2 Views:1370	Last Post by xavier 2 years 7 months ago
PMP membrane Topic started 3 years 3 days ago, by gvdmm Last Post 2 years 10 months ago by riccardo	Replies:3 Views:2237	Last Post by riccardo 2 years 10 months ago
Extending Martini Forcefield to Other Ions Topic started 3 years 2 months ago, by AditiKhot Last Post 3 years 2 months ago by siewert	Replies:1 Views:2050	Last Post by siewert 3 years 2 months ago
MARTINI Polyelectrolyte Polymer collapsing into helical structures Topic started 3 years 5 months ago, by mboy@seas.upenn.edu Last Post 3 years 5 months ago by mboy@seas.upenn.edu	Replies:0 Views:2359	Last Post by mboy@seas.upenn.edu 3 years 5 months ago
Force constants for a new molecule Topic started 3 years 7 months ago, by ahq-ujn Last Post 3 years 7 months ago by peterkroon	Replies:1 Views:2250	Last Post by peterkroon 3 years 7 months ago
Martinize.py empty output Topic started 3 years 8 months ago, by ak418 Last Post 3 years 8 months ago by ak418	Replies:2 Views:1791	Last Post by ak418 3 years 8 months ago
Box burst when running NPT ensemble Topic started 3 years 10 months ago, by realjun.zhou Last Post 3 years 9 months ago by vainikka	Replies:1 Views:2036	Last Post by vainikka 3 years 9 months ago
Ionizable lipid Topic started 3 years 10 months ago, by namit91 Last Post 3 years 10 months ago by namit91	Replies:2 Views:1763	Last Post by namit91 3 years 10 months ago
ATP parameters Topic started 11 years 2 weeks ago, by yescalona Last Post 4 years 1 month ago by Carsten	Replies:10 Views:23.6k	Last Post by Carsten 4 years 1 month ago
Modeling Polymers - AA Models for Bonded Parametrization Topic started 4 years 3 months ago, by TravisM Last Post 4 years 3 months ago by riccardo	Replies:1 Views:1881	Last Post by riccardo 4 years 3 months ago
Any ideas for how to map 2,2,2-trifluoroethanol Topic started 4 years 4 months ago, by nanogod Last Post 4 years 4 months ago by siewert	Replies:1 Views:1953	Last Post by siewert 4 years 4 months ago

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General Purpose Coarse-Grained Force Field

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Other Molecules 131 topics