General topics 676 topics

Category

Martini Philosophy 61 topics

Why 4-to-1 mapping? Why a limited number of particle types?
Problem in AA to CG file con ...
by mukhergm
2 months 3 weeks ago

Tools 237 topics

Scripts, programs and software to use with Martini simulations.
Re: Protein - membrane lipids cont ...
by Luciferase
2 weeks 20 hours ago

mdp Options 95 topics

Simulation parameters for Martini simulations.
choosing mdp file for lipid si ...
by shakira
11 hours 39 minutes ago

Other 144 topics

Everything that doesn't fit anywhere else.
Re: error message 'Topology includ ...
by johnd
1 month 3 days ago

Tutorial 113 topics

Issues about the Martini tutorial
Re: lipids with the lipidome tutor ...
by vainikka
4 weeks 1 day ago

Multiscaling 4 topics

Combining different levels of resolution.
Re: Martini waters in the hybrid m ...
by p278107
5 months 1 week ago

Dry Martini 7 topics

Martini with implicit water.
Re: membrane folding using dry MAR ...
by CharlyE
5 months 2 weeks ago
Welcome to Martini 3's own little forum. Don't forget to post the relevant version number to the questions and/or remarks.
Re: Missing bond for Cyclohexane
by vainikka
1 week 1 day ago

Force Fields 397 topics

Category

Lipids 121 topics

Everything that has to do with the original Martini lipid forcefield.
Re: DPC single monomer
by atefeh.ghlzd
1 month 2 weeks ago

Proteins 116 topics

Everything that has to do with the Martini extension for proteins and peptides.
Extending the Martini coarse-g ...
by CGMD
2 weeks 3 days ago

Sugars 4 topics

Everything concerning the Sweet Martini sugar extension.
Re: Tutorial on Sugars
by sruthip
1 week 6 days ago

Water 31 topics

Everything about water, since (almost) every biological system contains water.
Re: Yet another thread about LINCS ...
by riccardo
4 months 2 weeks ago

Nucleotides 25 topics

Everything that has to do with the Martini extension to nucleotides.
Re: Martini dsRNA tutorial setup c ...
by ibrahim
5 months 2 days ago

Other Molecules 100 topics

Any question about molecules that doesn't fit in the other forums? Post it here.
MARTINI Polyelectrolyte Polyme ...
by mboy@seas.upenn.edu
1 month 11 hours ago
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