General topics 648 topics

Category

Martini Philosophy 58 topics

Why 4-to-1 mapping? Why a limited number of particle types?
Re: Differences between Martini 2. ...
by gypsy
2 weeks 3 days ago

Tools 231 topics

Scripts, programs and software to use with Martini simulations.
Re: Bonds between two chains/molec ...
by amin_sagar
1 month 1 day ago

mdp Options 90 topics

Simulation parameters for Martini simulations.
Re: Segmentation faults - core dum ...
by gypsy
2 weeks 3 days ago

Other 139 topics

Everything that doesn't fit anywhere else.
Re: How to calculate the binding e ...
by riccardo
2 weeks 4 days ago

Tutorial 107 topics

Issues about the Martini tutorial
Re: polyelectrolyte gmx distance f ...
by mboy@seas.upenn.edu
1 month 1 week ago

Multiscaling 4 topics

Combining different levels of resolution.
Re: Martini waters in the hybrid m ...
by p278107
1 week 3 days ago

Dry Martini 7 topics

Martini with implicit water.
Re: membrane folding using dry MAR ...
by CharlyE
2 weeks 4 days ago
Welcome to Martini 3's own little forum. Don't forget to post the relevant version number to the questions and/or remarks.
Martini 3.0 release?
by pela3247
1 month 1 week ago

Force Fields 388 topics

Category

Lipids 119 topics

Everything that has to do with the original Martini lipid forcefield.
Re: Viscosity of a surfactant mice ...
by realjun.zhou
1 week 1 day ago

Proteins 112 topics

Everything that has to do with the Martini extension for proteins and peptides.
Re: Very high LJ interactions
by vainikka
1 month 6 days ago

Sugars 4 topics

Everything concerning the Sweet Martini sugar extension.
Re: Covalently link glycan (NAG) g ...
by siladitya.padhi
1 week 1 day ago

Water 31 topics

Everything about water, since (almost) every biological system contains water.
Yet another thread about LINCS ...
by mboy@seas.upenn.edu
2 days 17 hours ago

Nucleotides 25 topics

Everything that has to do with the Martini extension to nucleotides.
Re: Martini dsRNA tutorial setup c ...
by ibrahim
4 days 19 hours ago

Other Molecules 97 topics

Any question about molecules that doesn't fit in the other forums? Post it here.
Re: Box burst when running NPT ens ...
by vainikka
3 days 23 hours ago
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