General topics 724 topics

Category

Martini Philosophy 64 topics

Why 4-to-1 mapping? Why a limited number of particle types?
Re: Backbone dihedrals at ends of ...
by paulocts
1 week 3 days ago

Tools 252 topics

Scripts, programs and software to use with Martini simulations.
it can help to add cutoffs in ...
by cneale
2 days 18 hours ago

mdp Options 97 topics

Simulation parameters for Martini simulations.
Re: Warning oscillational period w ...
by xavier
1 week 4 days ago

Other 154 topics

Everything that doesn't fit anywhere else.
Re: Parameterizing a molecule cont ...
by Sadeghi
3 weeks 4 days ago

Tutorial 121 topics

Issues about the Martini tutorial
Re: CG MD for new Molecule
by vainikka
1 week 4 days ago

Multiscaling 5 topics

Combining different levels of resolution.
Tabulated potentials
by almeida
7 months 1 week ago

Dry Martini 7 topics

Martini with implicit water.
Re: membrane folding using dry MAR ...
by CharlyE
1 year 1 month ago
Welcome to Martini 3's own little forum. Don't forget to post the relevant version number to the questions and/or remarks.
Increasing Protein-Water Inter ...
by nkho
1 week 1 day ago

Force Fields 416 topics

Category

Lipids 126 topics

Everything that has to do with the original Martini lipid forcefield.
Re: Cholesterol beta model pre-rel ...
by paulocts
2 days 21 hours ago

Proteins 123 topics

Everything that has to do with the Martini extension for proteins and peptides.
Re: Curcumin coarse grained (beads ...
by riccardo
2 weeks 4 days ago

Sugars 6 topics

Everything concerning the Sweet Martini sugar extension.
Re: aggregation of proteins in pre ...
by riccardo
4 weeks 1 day ago

Water 33 topics

Everything about water, since (almost) every biological system contains water.
Re: Water not filling the box (pol ...
by vainikka
5 months 3 weeks ago

Nucleotides 26 topics

Everything that has to do with the Martini extension to nucleotides.
Re: Nucleic acid simulation with M ...
by peterkroon
3 months 2 weeks ago

Other Molecules 102 topics

Any question about molecules that doesn't fit in the other forums? Post it here.
Re: PMP membrane
by riccardo
1 month 2 weeks ago
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