General topics 541 topics

Category

Martini Philosophy 40 topics

Why 4-to-1 mapping? Why a limited number of particle types?
Re: create sekundär struktur and l ...
by Newguy
5 months 2 weeks ago

Tools 193 topics

Scripts, programs and software to use with Martini simulations.
Re: Missing beads of Glycolipids: ...
by bart
6 days 5 hours ago

mdp Options 77 topics

Simulation parameters for Martini simulations.
Relative dielectric constant
by sk
2 months 2 weeks ago

Other 124 topics

Everything that doesn't fit anywhere else.
Re: Problem with mapping
by sot
1 month 6 days ago

Tutorial 95 topics

Issues about the Martini tutorial
"LINCS WARNING" for EINeDyn in ...
by lanselibai
6 days 32 minutes ago

Multiscaling 1 topic

Combining different levels of resolution.
Re: multiscaling
by riccardo
1 month 1 week ago

Dry Martini 7 topics

Martini with implicit water.
Re: make a lipid Bilayer
by bart
5 months 3 weeks ago
Welcome to Martini 3's own little forum. Don't forget to post the relevant version number to the questions and/or remarks.
Re: Sugar models
by bart
4 months 3 days ago

Force Fields 343 topics

Category

Lipids 106 topics

Everything that has to do with the original Martini lipid forcefield.
Re: PEGylated Lipid
by dariush
5 days 2 hours ago

Proteins 104 topics

Everything that has to do with the Martini extension for proteins and peptides.
How the pH is reflected in the ...
by lanselibai
5 days 23 hours ago

Sugars 3 topics

Everything concerning the Sweet Martini sugar extension.
Re: Sucrose monolaurate - MARTINI ...
by zidarko
3 months 1 week ago

Water 26 topics

Everything about water, since (almost) every biological system contains water.
Re: Polarizable water : LINCS warn ...
by peterkroon
2 months 4 weeks ago

Nucleotides 16 topics

Everything that has to do with the Martini extension to nucleotides.
Re: Problem generating RNA topolog ...
by ifaustino
5 months 1 week ago

Other Molecules 88 topics

Any question about molecules that doesn't fit in the other forums? Post it here.
Re: Parameterizing new molecule
by Pim
2 months 2 weeks ago
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