Nucleotides 28 topics

Everything that has to do with the Martini extension to nucleotides.

Subject	Replies / Views	Last Post
martinize script for RNA with distance greater than cutoff Topic started 16 hours 30 minutes ago, by mandar Last Post 16 hours 30 minutes ago by mandar	Replies:0 Views:5	Last Post by mandar 16 hours 30 minutes ago
Building 2.2 kb ssDNA Topic started 4 days 2 hours ago, by Junb Last Post 4 days 2 hours ago by Junb	Replies:0 Views:24	Last Post by Junb 4 days 2 hours ago
Nucleic acid simulation with Martini3 Topic started 5 months 1 week ago, by devP Last Post 5 months 1 week ago by peterkroon	Replies:1 Views:1127	Last Post by peterkroon 5 months 1 week ago
Martini tutorials: DNA Topic started 4 years 4 months ago, by ChristinaL Last Post 6 months 2 days ago by Abhi	Replies:1 Views:3706	Last Post by Abhi 6 months 2 days ago
Martini dsRNA tutorial setup crashing for long runs. Topic started 1 year 2 months ago, by ibrahim Last Post 1 year 2 months ago by ibrahim	Replies:3 Views:2086	Last Post by ibrahim 1 year 2 months ago
MD run failing Topic started 1 year 5 months ago, by Fondyffendof Last Post 1 year 3 months ago by bart	Replies:12 Views:1144	Last Post by bart 1 year 3 months ago
CG mapping of a rosette nanotube Topic started 1 year 7 months ago, by karra.v Last Post 1 year 7 months ago by karra.v	Replies:0 Views:920	Last Post by karra.v 1 year 7 months ago
Building CG DNA using martinize-dna.py Topic started 7 years 5 months ago, by doa.hawamdeh Last Post 1 year 7 months ago by GhazalehYA	Replies:4 Views:4816	Last Post by GhazalehYA 1 year 7 months ago
DNA/peptide/lipid Topic started 1 year 9 months ago, by Lati Last Post 1 year 8 months ago by riccardo	Replies:1 Views:1212	Last Post by riccardo 1 year 8 months ago
RDD question Topic started 2 years 2 months ago, by daniloboskovic Last Post 2 years 1 month ago by bart	Replies:4 Views:1351	Last Post by bart 2 years 1 month ago
Elastic network for complex rna strucutres Topic started 2 years 2 months ago, by ibrahim Last Post 2 years 2 months ago by daniloboskovic	Replies:1 Views:1398	Last Post by daniloboskovic 2 years 2 months ago
RNA to martini coarse grain conversion Topic started 2 years 3 months ago, by daniloboskovic Last Post 2 years 2 months ago by daniloboskovic	Replies:1 Views:1114	Last Post by daniloboskovic 2 years 2 months ago
How to retain HETATM? Topic started 2 years 6 months ago, by LucianF Last Post 2 years 5 months ago by peterkroon	Replies:6 Views:1642	Last Post by peterkroon 2 years 5 months ago
RNA helix Topic started 2 years 7 months ago, by dariush Last Post 2 years 7 months ago by dariush	Replies:8 Views:1507	Last Post by dariush 2 years 7 months ago
Problem generating RNA topology - bases not recognized by martinize Topic started 3 years 1 month ago, by sajjad.ir Last Post 3 years 1 month ago by ifaustino	Replies:2 Views:2144	Last Post by ifaustino 3 years 1 month ago
Martini parameters for RNA Topic started 5 years 4 months ago, by bt12d026 Last Post 4 years 4 months ago by ifaustino	Replies:10 Views:6269	Last Post by ifaustino 4 years 4 months ago
Topology for cyclic systems Topic started 5 years 3 weeks ago, by mohsen Last Post 4 years 10 months ago by peterkroon	Replies:1 Views:3108	Last Post by peterkroon 4 years 10 months ago
Protein RNA complexes Topic started 7 years 1 month ago, by harikk369 Last Post 5 years 4 weeks ago by jaakko	Replies:3 Views:4127	Last Post by jaakko 5 years 4 weeks ago
DNA with polarized water Topic started 5 years 2 months ago, by shibalagu Last Post 5 years 1 month ago by shibalagu	Replies:2 Views:3590	Last Post by shibalagu 5 years 1 month ago
Holliday Junction Conformational Changes? Topic started 5 years 2 months ago, by jonasori Last Post 5 years 1 month ago by jonasori	Replies:2 Views:3120	Last Post by jonasori 5 years 1 month ago

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Nucleotides 28 topics