normal Doubt for ElNeDyn in martinize2

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2 years 11 months ago #8968 by ROY
Doubt for ElNeDyn in martinize2 was created by ROY
Dear all,
I am a bit confused about using martinize2 for ElNeDyn modeling of a protein system. However, with martinize.py I can do it but in the generated CG file, the bead name is not consistent with the martini3 force field.

Looking forward to your help/suggestion.

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2 years 11 months ago #8970 by riccardo
Replied by riccardo on topic Doubt for ElNeDyn in martinize2
This tutorial uses martinize and martini3: www.cgmartini.nl/index.php/martini-3-tut...all-molecule-binding

The Supplementary info of the Martini 3 paper should contain how to generate protein models with martinize2 and martini 3.

Did you review and try to reproduce both of the above?

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