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  3. Martini 3 open-beta

Martini 3 open-beta 47 topics

Welcome to Martini 3's own little forum. Don't forget to post the relevant version number to the questions and/or remarks.

Subject Replies / Views Last Post
unanswered
Marini 3 Charmm36 mapping file for cholesterol
Topic started 3 weeks 2 days ago, by songhd
Last Post 3 weeks 2 days ago
by songhd
Replies:0
Views:224
Last Post by songhd
3 weeks 2 days ago
unanswered
Martini 3 Nucleic Acid Parameters and Mappings
Topic started 4 months 1 week ago, by pcmartini
Last Post 4 months 1 week ago
by pcmartini
Replies:0
Views:695
Last Post by pcmartini
4 months 1 week ago
normal
Protein System tends to collapse while using Martini 3
Topic started 6 months 1 day ago, by mkarroum
Last Post 6 months 1 day ago
by bart
Replies:1
Views:565
Last Post by bart
6 months 1 day ago
normal
System blows up when restarting with Martini3-Go?
Topic started 8 months 2 weeks ago, by smith.12510
Last Post 8 months 2 weeks ago
by smith.12510
Replies:1
Views:665
Last Post by smith.12510
8 months 2 weeks ago
normal
Martini3 parameters for PIP lipids
Topic started 2 years 6 months ago, by anjukris
Last Post 10 months 4 days ago
by Joufflu
Replies:4
Views:5800
Last Post by Joufflu
10 months 4 days ago
normal
Sitosterol Parameters in Martini 3
Topic started 10 months 3 weeks ago, by Joufflu
Last Post 10 months 2 weeks ago
by Joufflu
Replies:2
Views:589
Last Post by Joufflu
10 months 2 weeks ago
normal
Modeling Urea Molecule
Topic started 1 year 6 months ago, by shalinijr
Last Post 11 months 2 weeks ago
by LiguoWang
Replies:1
Views:946
Last Post by LiguoWang
11 months 2 weeks ago
normal
Lipids in Martini 2 vs Martini 3
Topic started 11 months 2 weeks ago, by pcmartini
Last Post 11 months 2 weeks ago
by pcmartini
Replies:2
Views:496
Last Post by pcmartini
11 months 2 weeks ago
normal
logP calculation using martini3
Topic started 1 year 6 months ago, by yogi@martini
Last Post 1 year 4 months ago
by riccardo
Replies:1
Views:1940
Last Post by riccardo
1 year 4 months ago
normal
bulid a cg model for organics molecule
Topic started 1 year 10 months ago, by LeMEI1
Last Post 1 year 9 months ago
by riccardo
Replies:5
Views:1662
Last Post by riccardo
1 year 9 months ago
normal
How to deal with water in a large system simulation
Topic started 1 year 10 months ago, by Junb
Last Post 1 year 10 months ago
by riccardo
Replies:1
Views:1057
Last Post by riccardo
1 year 10 months ago
unanswered
Advice for ER membrane: Martini2 or Martini3 ?
Topic started 1 year 10 months ago, by ttubiana
Last Post 1 year 10 months ago
by ttubiana
Replies:0
Views:1043
Last Post by ttubiana
1 year 10 months ago
normal
charged small molecule parameterization
Topic started 1 year 10 months ago, by Junb
Last Post 1 year 10 months ago
by Junb
Replies:2
Views:1210
Last Post by Junb
1 year 10 months ago
unanswered
System crash when using more than 5 CPUs
Topic started 2 years 2 weeks ago, by jpacalon
Last Post 2 years 2 weeks ago
by jpacalon
Replies:0
Views:7398
Last Post by jpacalon
2 years 2 weeks ago
normal
Arg and Lys Exclusions for Nonbonded Interaction
Topic started 2 years 2 months ago, by mason
Last Post 2 years 2 months ago
by riccardo
Replies:2
Views:1187
Last Post by riccardo
2 years 2 months ago
normal
Martinize2 for Solvated System
Topic started 2 years 3 months ago, by mason
Last Post 2 years 2 months ago
by mason
Replies:2
Views:1473
Last Post by mason
2 years 2 months ago
unanswered
GoMartini issue
Topic started 2 years 6 months ago, by aishwaryts
Last Post 2 years 6 months ago
by aishwaryts
Replies:0
Views:2072
Last Post by aishwaryts
2 years 6 months ago
unanswered
SCFix - Martini 3.0.0
Topic started 2 years 6 months ago, by Marius
Last Post 2 years 6 months ago
by Marius
Replies:0
Views:1302
Last Post by Marius
2 years 6 months ago
normal
Is bbsc.sh script necessary for trasmembrane proteins?
Topic started 2 years 6 months ago, by azadehalavi
Last Post 2 years 6 months ago
by sebastian
Replies:1
Views:1751
Last Post by sebastian
2 years 6 months ago
unanswered
unstable protein-peptide binding with Martini 3
Topic started 2 years 6 months ago, by qiaobf
Last Post 2 years 6 months ago
by qiaobf
Replies:0
Views:1223
Last Post by qiaobf
2 years 6 months ago
  1. General topics
  3. Martini 3 open-beta
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