Lipids

Martini lipidome

This new Martini lipid page was just opened on June 11th 2015, please let us know if there are any problems with this page. All the previously available .itp files can be accessed in the Collection table bellow with the prefix “Old”.

 

Available Martini lipid topologies are listed below according to their major category. Additional information for each lipid, other topologies (e.g. Dry Martini, alternative, old), and supporting files can be found on the subpage of each lipid. Collections of lipid topologies can be found at the bottom of this page for ease of download. For explanation of the lipid naming schema and the Martini lipid parameterization philosophy see the Martini lipid details page. For further background reading on the Martini lipidome, see:

  • T.A. Wassenaar, H.I. Ingólfsson, R.A. Böckmann, D.P. Tieleman, S.J. Marrink. Computational lipidomics with insane: a versatile tool for generating custom membranes for molecular simulations. JCTC, 11:2144–2155, 2015. abstract

If you have developed additional Martini lipid topologies and would like to post them here please contact Siewert J. Marrink This email address is being protected from spambots. You need JavaScript enabled to view it. or Helgi I. Ingolfsson This email address is being protected from spambots. You need JavaScript enabled to view it..

 

Phosphatidylcholine (PC)



Phosphatidylethanolamine (PE)



Phosphatidylserine (PS)



Phosphatidylglycerol (PG)



Phosphatidic acid (PA)



Phosphatidylinositols



Glycerols



Lysophosphatidylcholine (LPC)



Sphingomyelin (SM)



Ceramide (CER)



Glycosphingolipids



Glycoglycerolipids



Sterols





Surfactants



Fatty acids (FA)



Other



Collections